Heatplus - Heatmaps with row and/or column covariates and colored clusters
Display a rectangular heatmap (intensity plot) of a data matrix. By default, both samples (columns) and features (row) of the matrix are sorted according to a hierarchical clustering, and the corresponding dendrogram is plotted. Optionally, panels with additional information about samples and features can be added to the plot.
Last updated 26 days ago
microarrayvisualization
7.64 score 5 packages 96 scripts 901 downloadsOCplus - Operating characteristics plus sample size and local fdr for microarray experiments
This package allows to characterize the operating characteristics of a microarray experiment, i.e. the trade-off between false discovery rate and the power to detect truly regulated genes. The package includes tools both for planned experiments (for sample size assessment) and for already collected data (identification of differentially expressed genes).
Last updated 26 days ago
microarraydifferentialexpressionmultiplecomparison
4.08 score 2 scripts 288 downloadsmaCorrPlot - Visualize artificial correlation in microarray data
Graphically displays correlation in microarray data that is due to insufficient normalization
Last updated 26 days ago
microarraypreprocessingvisualization
3.30 score 1 scripts 213 downloads